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Abstract |
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Specific cytochrome P450 enzymes show tissue-specific induction, and different regulatory units for expression of these enzymes have been identified. The regulation of the phenobarbital (PB)-inducible P450
genes has been relatively well characterized in terms of PB induction, but less so with regard to tissue-specific expression. CYP2B2 is not expressed in the rat lung, whereas cytochrome P450 2B1 (CYP2B1) is a
dominating enzyme in the same tissue. The constitutive expression of CYP2B1 and CYP2B2 in liver is
low, but inducible by PB, whereas the pulmonary expression of CYP2B1 is not induced by PB. This indicates utilization of different regulating mechanisms in the two organs. A gene construct consisting of the
structural gene for LacZ coupled to a 1.3-kb 5' fragment of the rat CYP2B1 gene was used to generate
transgenic mice in order to further elucidate the mechanism behind tissue-specific expression and PB induction of the CYP2B1 gene. Using reverse transcriptase-polymerase chain reaction on total RNA extracted from lung and liver tissue, a lung-specific transcription of the transgene was observed. Transcription of the construct was also observed in livers from PB-treated transgenic animals. By histochemical
staining of lung sections with 5-bromo-4-chloro-3-indolyl-
-D-galactopyranoside (X-gal), we demonstrated expression at the protein level in bronchiolar cells. In conclusion, our results revealed that the region extending to
1.3 kb in the 5' flanking region of the CYP2B1 gene included sequences that could
partly account for the lung-specific transcription of CYP2B1 and the hepatic induction of CYP2B1 transcription by PB.
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Introduction |
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Cytochrome P (CYP) monooxygenases comprise a multigene family whose gene products are essential in the biotransformation of numerous endogenous and exogenous compounds. The P450 superfamily is divided into families and subfamilies. The cytochrome P (CYP) 2B1 and 2B2 genes are members of the P450 2B subfamily and are 98% similar in their mRNA and amino acid sequences (1, 2). This subfamily includes an estimated eight to 11 members at the genomic level, and contains P450 enzymes induced by phenobarbital (PB) or by hormones, as well as P450 genes not induced by PB (3). CYP2B1 is the dominating enzyme in rat lung (4). To date, altogether, six P450 enzymes, including CYP2A3, 2E1, 3A2, 4B1, and to a minor extent 1A1, have been detected in rat lung (4). In contrast, the CYP2B2 gene is not expressed in rat lung tissue (7), although it is expressed in rat liver. Rat pulmonary CYP2B1 expression at both the mRNA and the protein level has been reported at Day 7 after birth (8, 10). Thereafter, the pulmonary expression of CYP2B1 reaches its maximum from 4-6 wk after birth and remains at a high level. The expression of CYP2B1 in liver is low compared with that in lung tissue, and reaches a maximum during the first 4 wk after birth, followed by a decrease in level. These findings indicate different regulating mechanisms for CYP2B1 in lung and liver. However, it is most likely that CYP2B1 and CYP2B2 are to a large extent regulated in a similar way in liver cells. At a cellular level, pulmonary CYP2B1 expression is found mainly in alveolar type II cells, bronchiolar Clara cells, and nonciliated epithelial cells in trachea and larger bronchi (4, 11).
CYP2B1 and 2B2 are encoded by separate genetic loci,
indicated to be nonallelic and closely linked to each other
on the same autosome (17). The gene for CYP2B1 is 23 kb
long and is separated into nine exons (18). This structure is
very similar to that of the 2B2 gene, except for the first intron of CYP2B1, which is about 9 kb longer than that of
the 2B2 gene (18). The greatest divergence in base composition between the two genes has been observed in exons 7 and 8. Close sequence homology between the promoter
regions of the 2B1 and 2B2 genes has been found at up to
2,300 bp (19), with the exception of a repeated cis-acting (CA) sequence at position
255 (18), which was found to
be significantly shorter in the 2B1 gene, and a 12-bp insert
at position
706 in the 2B1 gene. Relatively little is known
about the complex pattern of regulation involved in the
tissue-specific and age-dependent expression of these
genes. However, the CYP2B genes are strongly induced
transcriptionally in liver cells by PB treatment (18, 20),
and the involvement of a drug and heme-modulated transcription factor in liver has been indicated (21, 22). In contrast, pulmonary CYP2B1 is not induced by PB and is
probably induced to only a small extent by other compounds, although one report describes the induction of
pulmonary CYP2B1 by ozone (23).
Although several studies have indicated a role for genetic elements located close to the transcription initiation
site of CYP2B2 in the PB-induction response (21, 23),
other studies have demonstrated the importance of regulatory elements further upstream of the core promoter region of the CYP2B gene (20, 24, 31, 32). Recently, PB-
enhancer activity has been associated with the function
of DNA sequences at about
2.3 kbp in the rat CYP2B2
and mouse Cyp2b10 genes (32). A fully PB-inducible
enhancer element was identified in this region of the
Cyp2b10 gene, and was designated phenobarbital-responsive enhancer module (PBREM) (35).
The purpose of our work was to further elucidate tissue- and phenobarbital-dependent regulatory mechanisms of the CYP2B1 gene with a reporter gene construct introduced into transgenic mice. Our results suggested that sequences within 1.3 kb of the transcription start site in the CYP2B1 gene are important for regulation of pulmonary transcription of CYP2B1, and also for PB-induced transcription of CYP2B1 in liver cells.
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Materials and Methods |
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Polymerase Chain Reaction Amplification of Rat Genomic DNA
Rat CYP2B1 and 2B2 5' flanking regions (including exon 1) were specifically amplified with the polymerase chain reaction (PCR) technique, using the GenAmp DNA amplification reagent kit (Perkin-Elmer, Roche Molecular Systems, Inc., Branchburg, NJ) essentially according to the manufacturer's instructions. DNA prepared from male Sprague-Dawley rat livers (Clontech Laboratories Inc., Palo Alto, CA) was used as a template, and the oligomer primers used in the reaction were synthesized to corresponding to the CYP2B1 and 2B2 5' upstream sense strand (primer 1: 5'-GCAAGCTTTTCCTCTAAGTGTCC-3', and primer 2: 5'-GCAAGCTTCAAACATAATCACATGTACCCA-3'), or to the downstream exon 1 antisense strand (primer 3: 5'-GCAAGCTTGAAGGAATTGAGGAGGCC-3'). The primers included an HindIII cloning site. The amplification reactions were performed with a hot-start procedure. Cycling conditions were one cycle at 50°C for 2 min, 30 cycles at 72°C for 3.5 min, and 95°C for 30 s; one cycle 72°C for 10 min; and a 4°C soak for 10 s. A 10-s extension of the 72°C incubation step was included in each cycle. The amplified products were analyzed through gel electrophoresis followed by ethidium bromide staining, yielding PCR products of 1,650 bp. Amplified 1,650-bp fragments were inserted into pGem 4z plasmids (Promega, Madison, WI), using the HindIII cloning sites. Three positive clones were selected and characterized by sequence analysis. Plasmid DNA was prepared according to Kraft and coworkers (36), and DNA sequencing was performed essentially according to the dideoxy chain termination method of Sanger and coworkers (37), using the Sequenase kit (USB Biochemicals, Cleveland, OH).
Northern Blotting
Total cytoplasmic RNA was prepared from PB-treated
and control rat lungs and livers, using the guanidinium
thiocyanate-phenol-chloroform extraction method (38),
and 10 µg of each sample was separated on a formaldehyde-containing gel and transferred to a Hybond-N filter
(Amersham, Buckinghamshire, UK) by capillary blotting. Filters were hybridized overnight at 42°C with probes
corresponding to exon 1 (650-bp fragment cut with NcoI
and PstI) and exons 7-9 (PR-17 complementary DNA
[cDNA]) (8) labeled with (32P)deoxycytosine triphosphate
([32P]dCTP) (3,000 ci/mmol) with the multiprime labeling
system (Amersham) (8), and subsequently washed. Films
were developed after overnight exposure at
70°C with
intensifying screens.
Construction of a Reporter Gene and Development of a Transgenic Animal Model
To identify parts of the CYP2B1 gene necessary for lung-specific expression, a 1,334-bp 5' fragment (released from
the CYP2B1 clone by HindIII and SphI restriction enzymes) was coupled to the structural gene for LacZ, and
the construct was transfected into primary hepatocytes from
rats and into the human hepatoma cell line HepG2. Positive staining with 5-bromo-4-chloro-3-indolyl-
-D-galactopyranoside (X-gal) showed that the construct was able to
drive expression in liver cells. A transgenic mouse model
was thereafter developed at the Transgenie Core Facility
of the Karolinska Institute, Novum, by injecting the construct into fertilized mouse oocytes. Integration of the
construct was determined by PCR amplification of tail
DNA, using LacZ primers (sense: GCATCGAGCTGGGTAATAAGCGTTGGCAAT; antisense: GACACCAGACCAACTGGTAATGGTAGCGAC) and cycling parameters described by Hanley and Merlie (39). The
transgene copy number in the transgenic animals was estimated by adding serial dilutions of a known amount of
LacZ copies to 12.5 ng of mouse liver DNA, prepared from either a transgenic animal or from a control mouse
with the Wizard Genomic DNA purification kit (Promega).
Amplification by PCR, using LacZ and rapsyn primers (internal control for equal loading), was performed for 28 cycles, essentially as previously described (39). The amounts
of PCR products were measured by densitometry after
separation by gel electrophoresis, and were plotted versus
the number of plasmid template copies added of the transgene.
Animals and Treatments
C57/BI6xCBA mice were used for generation of transgenic animals. All animals were kept in rooms with a 12 h day/12 h night diurnal cycle, and were given Labfor R36 standard pelleted laboratory chow (Lactamin, Stockholm, Sweden) and water ad libitum. Transgenic offspring from two founders, T29-21 and T29-30, were used in the experiments. Offspring of T29-30 origin were further bred to a homozygous line through sister and brother matings before being used in experiments. The T29-21 offspring were analyzed in a heterozygous state. Homozygous transgenic mice derived from the T29-30 founder and control mice were treated with PB sodium salt in saline for 4 d (80 mg/ kg/d intraperitoneally) and were killed 24 h after the last injection, following the procedure described by Honkakoski and Lang (40).
Reverse Transcription-PCR
Using the method of Chomczynski and Sacchi (38), total
cytoplasmic RNA was prepared from lung and liver tissue
in transgenic mice (of both T29-21 and T29-30 origin) and
control mice, and from Balb MK mouse keratinocytes stably transfected with a plasmid containing the LacZ gene
coupled to the thymidine kinase (TK) promoter (positive
control). Total RNA was also prepared from PB-treated
mice (homozygous transgenic animals of T29-30 origin and control mice). Subsequently, the RNA was treated
with deoxyribonuclease (DNase), using DNase I supplied
in the total RNA kit from Scotlab (Scotlab Inc., Shelton,
CT) according to the manufacturer's protocol, and was
stored at
80°C until used in reverse transcription (RT)- PCR experiments.
From 1-2 µg of RNA was reverse transcribed using SUPERSCRIPT II RNase H-reverse transcriptase from Life Technologies (Gaithersburg, MD) according to the supplier's protocol with some modifications. Briefly, each reaction included 1 mM of deoxynucleotides, 1 µM of downstream primer, and the addition of 1.3 U ribonuclease inhibitor (RNasin) (Promega) in a total volume of 10 µl. The RT step was performed at 42°C for 50 min, followed by 15 min at 70°C. A negative control was obtained by omitting the enzyme. Five microliters of the solution from the RT step were subsequently added to the PCR reaction containing 1× PCR buffer, 2.5 mM MgCl2, 250 µM deoxynucleotide triphosphates (dNTPs), 1 µM forward and reverse LacZ primers, and 2.5 U Amplitaq Gold DNA polymerase (Perkin-Elmer) in a total volume of 20 µl. The cycling parameters were as follows: a total of 75 cycles, including denaturing at 94°C for 1 min and a combined annealing and elongation step at 72°C for 4 min, with a 1-s extension to the second step at every cycle. The RT-PCR experiments were performed with a DNA Thermal Cycler 480 (Perkin-Elmer). PCR products were subsequently size-fractionated on 1.5% agarose gels, stained with ethidium bromide and visualized under UV light.
Histochemistry
Lung and liver tissue from transgenic mice (T29-21 and T29-30) and control mice were fixed for 10 min in 0.5% glutaraldehyde in PBS, rinsed twice for 15 min in phosphate-buffered saline (PBS) containing 1 mM MgCl2, and incubated in 1 mg of X-gal/ml, 5 mM K3Fe(CN)6, 5 mM K4Fe(CN)6, and 1 mM MgCl2 in PBS for 17 h at 37°C. The samples were postfixed overnight at 4°C in 4% paraformaldehyde/0.5% glutaraldehyde in PBS according to the method of Engelhardt and colleagues (41). This was followed by embedding in paraffin. The tissue was cut in 8-µm sections and viewed under the microscope. X-gal staining was also performed, using lung and liver tissue from PB-treated mice (T29-30 transgene and control mice).
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Results |
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Isolation and Sequencing of CYP2B1 and 2B2 5' Flanking Region
By amplification of rat genomic DNA, plasmid clones containing the 5' flanking sequence of the CYP2B1 (Figure 1)
and 2B2 genes were isolated and sequenced from exon 1 to position
1,334. On the basis of a high degree of similarity with the previously reported 5' flanking sequence of
the CYP2B1 and CYP2B2 genes (18, 19, 31, 42, 43), two
clones were classified as CYP2B2 and one as CYP2B1
(data not shown).
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The sequence of the 2B1 fragment was almost identical
to previously reported 2B1 5' sequences (18, 19, 31). Comparison of the 2B2 and 2B1 sequences isolated in the study
to position
1,334 demonstrated 33 single-base substitutions, and one single-base (
703) and one two-base
(
271) insertion in 2B1. The previously reported deletion
of 26 bases in the repeated CA region (
272) was identified (19). The number of CA regions in the repeated CA
sequence at position
255 was observed to be five for 2B1, which is in accordance with previously reported results
(31). We also found that the repeated CA sequences varied in length among the different 2B2 clones (from 19-21
CA; data not shown). In resemblance to what was reported by Shaw and coworkers (19, 31), an insertion of
12 bases (CTAACCCAGAGA) at position
706 was observed in the P450 2B1 sequence.
RNA blots from PB-treated and control rats were probed with either an exon 1 probe or a cDNA (PR-17) corresponding to exons 7-9 (Figure 2). The PR-17 cDNA recognizes the two major PB-inducible rat liver P450 cytochromes, P450 2B1 and P450 2B2, and it was used to detect P450 2B1-specific mRNA in the lung, since the rat lung is known not to express any P450 2B2. Comparison of the two RNA blots revealed highly similar patterns, indicating identical expression of exon 1 and exons 7-9 in both lung and liver. This indicated the absence of an alternative splicing or transcription start site. In noninduced (control) liver, the signal is almost nondetectable. In confirmation of earlier reports, PB induced mrRNA expression in liver only.
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Generation of Transgenic Mice
In order to investigate the presence of regulatory sequences in the 5' flanking region of the CYP2B1 gene, a reporter gene construct containing 1,334 bp of the 5' sequence linked to the bacterial LacZ gene was made. The construct was functional and was able to drive expression of LacZ in both transfected primary rat hepatocytes and in the human hepatoma cell line HepG2 (data not shown). Transgenic mice were generated by introducing the gene construct into fertilized mouse oocytes. Four founders (two male and two female) were generated. Transmission of the transgene from two of the founders (T29-21 and T29-30) was confirmed. Both founders had integrated about the same number of copies of the transgene (four and five copies for the T29-21 and T29-30 founders, respectively; data not shown).
Tissue-Specific and PB-Inducible Expression of the Transgene
Results of RT-PCR analysis demonstrated the presence of transcribed mRNA corresponding to the CYP2B1/LacZ construct in lung tissue from the transgenic animals. The mRNA was seen as an amplified band of the expected 822-bp molecular weight (Figure 3). In the T29-21 transgenic offspring, this band was markedly stronger than in mice from the homozygous T29-30 line, indicating higher levels of transcription of the gene construct in lung tissue from the T29-21 animals. Omitting the reverse transcriptase enzyme from the RT-PCR procedure resulted in the absence of an 822-bp band. Importantly, no band was detected in liver tissue from transgenic mice, thus demonstrating the lung-specific transcription of the gene construct. Neither was any 822-bp band amplified with the use of RNA prepared from lung or liver tissue from the control mice (data not shown). However, when the experiments were performed with total cytoplasmic liver RNA from PB-treated transgenic mice (T29-30-derived homozygous mice), a band appeared with the expected molecular weight (Figure 3).
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Results of the histochemical staining for LacZ activity of lung and liver tissue from heterozygous T29-21-derived transgenic mice demonstrated a few positive cells in bronchiolar structures (Figures 4a and 4b), whereas no positively staining liver cells were observed (Figure 4d). In neither lung (Figure 4c) nor in liver sections (with or without PB treatment) from control mice or T29-30-derived transgenic mice were any X-gal-staining cells observed (data not shown), in accord with the generally lower transgene expression levels in the T29-30-derived transgenic line.
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Discussion |
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Recent results have reported the sequence of the rat
CYP2B1 promoter region from +27 to
3,878 bp (19) and
of the CYP2B2 promoter region to
2,345 bp (31). Shaw
and coworkers compared their sequence of the 5' flanking
region of the 2B1 gene with that of the 2B2 gene as reported by Hoffman and associates (43), and found the two
sequences to be almost identical up to
2,300 bp from
where the 2B1 sequence diverged significantly from the remaining published sequence of 2B2. Our results from sequencing of the rat 2B2 and 2B1 promoter regions up to
1,334 bp were in agreement with published data (18, 19,
31, 42), since we observed overall sequence homology
between the 5' flanking region of the two genes. Both the
differing length of the repeated CA sequence at
255 bp
and the previously identified 12-bp insertion at position
706 (19, 31) were observed in our CYP2B1 genomic clone.
We wanted to further elucidate the role of the 5' flanking region of the rat CYB2B1 gene in lung-specific transcription of CYP2B1, as well as in hepatic induction by
PB. The mode of regulation of tissue- or cell-specific expression of the CYP2B1 and 2B2 genes is largely unknown. Available data have indicated different regulatory mechanisms. A hierarchy of CA genomic control elements, each interacting with specific transacting factors,
could be envisioned. In this way, one control element
would respond to induction and another to different tissue- or cell-specific factors. For the murine surfactant protein-A (SP-A) gene, CA elements important for epithelial lung cell-specific transcription have been identified between positions
255 and
57 (45). This region contained
four nucleotide sequences similar to thyroid transcription
factor-1 (TTF-1) binding motifs (45). Interaction of TTF-1
with the DNA binding sites located in the 5'-flanking region of the murine surfactant protein (SP)-A gene, and enhancement of lung epithelial cell-specific expression in
vitro, was indicated (45). However, the role of TTF-1 as a
regulator of other lung cell-specific proteins is unclear. A
recent study using a reporter gene construct containing a
Clara cell secretory protein (CCSP) promoter region segment identified as giving cell-specific expression of CCSP
in H441 cells demonstrated high-level expression of the reporter gene in primary cultures of rat lung Clara cells (46).
However, although previous studies had shown that expression of TTF-1 affected the rat CCSP promoter in an
H441-cell model (47), and had demonstrated TTF-1 expression in Clara cells (46), its expression pattern did not
show any clear correlation with the expression of CCSP in
these Clara cells. In our gene construct, three potential
TTF-1 binding sites were observed (45, 48, 49), but since
they are also found in the 2B2 gene, which is not expressed
in rat lung, it is unlikely that TTF-1 plays any primary role
in expression of the CYP2B1/LacZ transgene in lung cells.
Interestingly, the existence of relatively few possible binding sites for liver-enriched transcription factors in the promoter region of the CYP2B1 and 2B2 genes has been reported (19). This could account for the low constitutive
expression of these genes in the liver. However, possible
binding sites for gene-regulatory proteins, such as activator protein-1 and nuclear factor-kB, as well as possible signal-transducer and activator-of-transcription (STAT) sites,
have been identified upstream of
800 bp in the CYP2B1
promoter (19), although their role in the tissue-specific expression of CYP2B1 is unknown.
Recently, the promoter regions of rat CYP2B1 and 2B2
were analyzed to
2,345 bp, using transient transfection of
a hepatic cell line (31). The highest reporter gene activity
was found with a deletion construct including only the
proximal 177 bp of the 5' flanking region of the CYP2B1
gene, thus indicating the presence of upstream sequences
with capacity to repress transcriptional activity of the
CYP2B1 gene. This was consistent with the results of Park
and colleagues, indicating a role for the proximal promoter region in transcription of the CYP2B1 gene (50). In
the work of Park and colleagues, a deletion in the region
between
110 bp and
57 bp in the CYP2B gene strongly
reduced promoter activity, indicating strong CA elements
in this region. The presence of sequences similar to a basal
transcription element (BTE) between
82 bp and
67 bp
(50) as well as a functional CCAAT/enhancer binding protein (C/EBP) site between
64 bp and
45 bp, were described. Mutation of these sequences in the CYP2B1 promoter region showed that these elements were involved
in the regulation of transcriptional activity. A role for
C/EBP
in tissue-specific gene expression was previously
demonstrated in hepatocytes (51), and a cooperative role
for C/EBP
and the transcription factor Sp1 in positive
regulation of CYP2D5 has been suggested. If an Sp1-like
protein binds to the BTE site of CYP2B1, it is possible
that a similar interaction between Sp1 and C/EBP family
members would be important for expression of CYP2B1
as well. However, although these BTE and C/EBP elements may be important for basal levels of transcription, it
is again highly unlikely that they play a role in lung-specific expression of the CYP2B1 gene, since they are present in both the 2B1 and 2B2 promoter regions.
Previous results obtained with CYP2B2 transgenes to
800 bp and
2,300 bp revealed no pulmonary expression
(20), whereas RT-PCR analysis revealed that our mice
transgenic for 2B1 to
1,334 bp of the 5' flanking region
exhibited lung expression of the gene and that hepatic tissue from PB-treated animals also expressed it. Thus, tissue-specific elements were present in our construct, but
were lacking in the previously analyzed 2B2 regions. An
interesting candidate element would be the 12-bp insertion at
706 bp (Figure 1). This element is lacking in the
2B2 promoter region but is relatively well conserved in the
corresponding mouse 2b10 gene (eight of 12 bases), which
is expressed in mouse lung (52). Furthermore, our results
in the histochemical staining of lung and liver tissue indicated that pulmonary transcription of our CYP2B1 gene
construct was restricted to only a few cells in the bronchioles of the transgenic mice. In these experiments we observed that the transgenic offspring of one of our founders,
T29-21, apparently transcribed the gene construct at
higher levels in their lungs than did the offspring of the
other founder. However, a variegated pattern of transgene
expression is a relatively common finding, and could be
explained by surrounding chromatin structure or possibly
by methylation (53, 54). On the basis of the staining pattern observed with X-gal, we suggest that transcription occurred in specific lung cells such as Clara cells. This is consistent with the relatively high level of expression of
CYP2B1 found in rat and mouse Clara cells (53), although
our results do not exclude the possibility that both mRNA
and protein are expressed in other cells but at levels below
the detection limits of the methods used.
The nature of PB-dependent regulatory elements in
mammalian CYP genes is so far unresolved, although a
role for CA sequences (Barbie-box-like sequences) close
to the transcription start site has been implicated (24).
However, other results have questioned the role of these
sequences in the PB-induction response. With rat CYP2B2
transgenes (20), it has been shown that although CA elements in the proximal region interacted with PB-modulated proteins and could be involved in the PB-induction
process (21, 29), these elements were not sufficient to mediate the induction response. However, these proximal elements could be part of the core promoter region, and not
specific PB-induction enhancers or activators. Consistent
with this, no major role of Barbie-box-like sequences in
basal or PB-induced mouse Cyp2b10 gene transcription was found in primary hepatocytes (52), nor did mutation
of similar sequences in the proximal CYP2B2 promoter affect the PB-inducibility of a reporter gene construct transiently transfected into rat liver cells (32). It has been proposed that the 2B2 gene is normally repressed by negative
regulatory factor(s) localized between
800 bp and
20
kb, and that these factors could be modified or released by
PB (20).
The presence of two PB-responsive regions in the CYP
genes (33, 52) has been suggested. In the mouse 2b10 gene,
these were located at approximately
2.3 kb and
1.0
kbp. In both the rat CYP2B2 and mouse Cyp2b10 genes,
the former region includes a PB response enhancer module element (PBREM) (32). In the Cyp2b10 gene, a
fully PB-inducible, 51-bp core enhancer element was identified within this region (35).
The upstream enhancer region at approximately
2.3
kbp contains an AGGTCA binding site for nuclear receptors and a TGGN-CCA region binding NF1/CEBP
(55).
These elements were found to be conserved in the upstream enhancer region of both the rat 2B1 gene and the
rat 2B2 gene (52). In all three genes (2B1, 2B2, and 2b10),
the proximal enhancer region at approximately
1.0 kbp
contains an AGGTCA element but not the NF1/CEBP
binding sequence. Thus, our construct contains this proximal PB-responsive region and is PB responsive, indicating
that the proximal enhancer also has a role in the PB-induction response. This is consistent with the fact that the previously reported
800 bp 2B2 transgene is without PB
responsiveness (20). Regarding the two PB-responsive regions in the CYP genes, it is interesting to observe that the upstream but not the proximal enhancer is functional with
a heterologous promoter in primary hepatocytes (52). It is
tempting to speculate that the upstream enhancer is functionally independent because of the presence of both an
AGGTCA and a CEBP
binding site, whereas the proximal enhancer may require interaction with the CEBP
site close to the promoter, and is therefore not PB inducible when linked to a heterologous promoter.
In conclusion, our results show that the region up to
1.3 kb in the 5' flanking region of the rat CYP2B1 gene
includes sequences important for lung-specific transcription of this gene, as well as hepatic induction of CYP2B1
transcription by PB. However, the expression levels of the
gene were low, indicating that additional elements, present further upstream or downstream, are necessary for efficient transcription.
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Footnotes |
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Address correspondence to: Rune Toftgård, Karolinska Institute, Department of Biosciences at Novum and Center for Nutrition and Toxicology, Novum, S-14157 Huddinge, Sweden. E-mail: Rune.Toftgard{at}cnt.ki.se
(Received in original form March 23, 1998 and in revised form February 22, 1999).
Abbreviations: activator protein-1, AP-1; CCAAT/enhancer binding protein, C/EBP; cis-acting, CA; cytochrome P-450, CYP; nuclear factor-
B,
NF-
B; nuclear receptor, NR; phenobarbital, PB; phosphate-buffered saline, PBS; polymerase chain reaction, PCR; reverse transcriptase, RT; reverse transcriptase-polymerase chain reaction, RT-PCR; signal transducer and activator of transcription, STAT; thyroid transcription factor 1, TTF-1; 5-bromo-4-chloro-3-indolyl-
-D-galactopyranoside, X-gal.
Acknowledgments: The transgenic mice used in our study were generated by the Transgene Core Facility at the Karolinska Institute, Novum. This work was supported in part by the European Science Foundation, the Norwegian Cancer Society, and the Swedish National Environmental Protection Agency.
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References |
|---|
|
|
|---|
1.
Giachelli, C. M.,
J. Lin-Jones, and
C. J. Omiecinski.
1989.
Isolation and
characterization of rat cytochrome P-450IIB gene family members: use of
the polymerase chain reaction to detect expression of a novel P-450
mRNA.
J. Biol. Chem.
264:
7046-7053
2. Gonzalez, F. J.. 1988. The molecular biology of cytochrome P450s [published erratum appears in Pharmacol. Rev. 1989; 41(1):91-92]. Pharmacol. Rev. 40: 243-288 [Medline].
3. Jean, A., A. Reiss, M. Desrochers, S. Dubois, E. Trottier, Y. Trottier, L. Wirtanen, M. Adesnik, D. J. Waxman, and A. Anderson. 1994. Rat liver cytochrome P450 2B3: structure of the CYP2B3 gene and immunological identification of a constitutive P450 2B3-like protein in rat liver. DNA Cell Biol. 13: 781-792 [Medline].
4. Baron, J., and J. M. Voigt. 1990. Localization, distribution, and induction of xenobiotic-metabolizing enzymes and aryl hydrocarbon hydroxylase activity within lung. Pharmacol. Ther. 47: 419-445 [Medline].
5.
de Waziers, I.,
P. H. Cugnenc,
C. S. Yang,
J. P. Leroux, and
P. H. Beaune.
1990.
Cytochrome P450 isoenzymes, epoxide hydrolase and glutathione
transferases in rat and human hepatic and extrahepatic tissues.
J. Pharmacol. Exp. Ther.
253:
387-394
6. Kimura, S., C. A. Kozak, and F. J. Gonzalez. 1989. Identification of a novel P450 expressed in rat lung: cDNA cloning and sequence, chromosome mapping, and induction by 3-methylcholanthrene. Biochemistry 28: 3798-3803 [Medline].
7. Guengerich, F. P.. 1990. Purification and characterization of xenobiotic- metabolizing enzymes from lung tissue. Pharmacol. Ther. 45: 299-307 [Medline].
8.
Törnquist, S.,
M. Sundin,
L. Möller,
J. Å. Gustafsson, and
R. Toftgård.
1988.
Age-dependent expression of cytochrome P-450b and metabolism of the
potent carcinogen 2-nitrofluorene in the rat lung.
Carcinogenesis
9:
2209-2214
9.
Omiecinski, C. J..
1986.
Tissue-specific expression of rat mRNAs homologous to cytochromes P-450b and P-450e.
Nucleic Acids Res.
14:
1525-1539
10.
Ji, C. M.,
W. V. Cardoso,
A. Gebremichael,
R. M. Philpot,
A. R. Buckpitt,
C. G. Plopper, and
K. E. Pinkerton.
1995.
Pulmonary cytochrome P-450
monooxygenase system and Clara cell differentiation in rats.
Am. J. Physiol.
269:
L394-L402
11. Devereux, T. R., B. A. Domin, and R. M. Philpot. 1989. Xenobiotic metabolism by isolated pulmonary cells. Pharmacol. Ther. 41: 243-256 [Medline].
12. Boyd, M. R.. 1977. Evidence for the Clara cell as a site of cytochrome P450-dependent mixed-function oxidase activity in lung. Nature 269: 713-715 [Medline].
13. Devereux, T. R., and J. R. Fouts. 1981. Xenobiotic metabolism by alveolar type II cells isolated from rabbit lung. Biochem. Pharmacol. 30: 1231-1237 [Medline].
14. Minchin, R. F., and M. R. Boyd. 1983. Localization of metabolic activation and deactivation systems in the lung: significance to the pulmonary toxicity of xenobiotics. Annu. Rev. Pharmacol. Toxicol. 23: 217-238 [Medline].
15.
Serabjit-Singh, C. J.,
C. R. Wolf,
R. M. Philpot, and
C. G. Plopper.
1980.
Cytochrome p-450: localization in rabbit lung.
Science
207:
1469-1470
16. Serabjit-Singh, C. J., S. J. Nishio, R. M. Philpot, and C. G. Plopper. 1988. The distribution of cytochrome P-450 monooxygenase in cells of the rabbit lung: an ultrastructural immunocytochemical characterization. Mol. Pharmacol. 33: 279-289 [Abstract].
17.
Yuan, P. M.,
D. E. Ryan,
W. Levin, and
J. E. Shively.
1983.
Identification
and localization of amino acid substitutions between two phenobarbital-inducible rat hepatic microsomal cytochromes P-450 by micro sequence
analyses.
Proc. Natl. Acad. Sci. USA
80:
1169-1173
18.
Suwa, Y.,
Y. Mizukami,
K. Sogawa, and
Y. Fujii-Kuriyama.
1985.
Gene
structure of a major form of phenobarbital-inducible cytochrome P-450 in
rat liver.
J. Biol. Chem.
260:
7980-7984
19. Shaw, P. M., M. Edigkaufer, J. Doehmer, and M. Adesnik. 1996. Sequence of the rat PB-inducible CYP2B1 promoter. Biochim. Biophys. Acta. 1305: 54-58 [Medline].
20.
Ramsden, R.,
K. M. Sommer, and
C. J. Omiecinski.
1993.
Phenobarbital induction and tissue-specific expression of the rat CYP2B2 gene in transgenic mice.
J. Biol. Chem.
268:
21722-21726
21.
Rangarajan, P. N., and
G. Padmanaban.
1989.
Regulation of cytochrome
P-450b/e gene expression by a heme- and phenobarbitone-modulated
transcription factor.
Proc. Natl. Acad. Sci. USA
86:
3963-3967
22.
Sultana, S.,
C. S. Nirodi,
N. Ram,
L. Prabhu, and
G. Padmanaban.
1997.
A
65-kDa protein mediates the positive role of heme in regulating the transcription of CYP2B1/B2 gene in rat liver.
J. Biol. Chem.
272:
8895-8900
23. Suzuki, E., Y. Takahashi, S. Aida, Y. Kimula, Y. Ito, and T. Miura. 1992. Alteration in surface structure of Clara cells and pulmonary cytochrome P-450b level in rats exposed to ozone. Toxicology 71: 223-232 [Medline].
24. Fulco, A. J.. 1991. P450BM-3 and other inducible bacterial P450 cytochromes: biochemistry and regulation. Annu. Rev. Pharmacol. Toxicol. 31: 177-203 [Medline].
25.
Wen, L. P.,
R. T. Ruettinger, and
A. J. Fulco.
1989.
Requirement for a
1-kilobase 5'-flanking sequence for barbiturate-inducible expression of the
cytochrome P-450BM-3 gene in Bacillus megaterium.
J. Biol. Chem.
264:
10996-11003
26.
Shaw, G. C., and
A. J. Fulco.
1992.
Barbiturate-mediated regulation of expression of the cytochrome P450BM-3 gene of Bacillus megaterium by
Bm3R1 protein.
J. Biol. Chem.
267:
5515-5526
27.
Shaw, G. C., and
A. J. Fulco.
1993.
Inhibition by barbiturates of the binding
of Bm3R1 repressor to its operator site on the barbiturate-inducible cytochrome P450BM-3 gene of Bacillus megaterium.
J. Biol. Chem.
268:
2997-3004
28.
Wen, L. P., and
A. J. Fulco.
1987.
Cloning of the gene encoding a catalytically self-sufficient cytochrome P-450 fatty acid monooxygenase induced
by barbiturates in Bacillus megaterium and its functional expression and
regulation in heterologous (Escherichia coli) and homologous (Bacillus
megaterium) hosts.
J. Biol. Chem.
262:
6676-6682
29.
He, J. S., and
A. J. Fulco.
1991.
A barbiturate-regulated protein binding to a
common sequence in the cytochrome P450 genes of rodents and bacteria.
J. Biol. Chem.
266:
7864-7869
30.
Liang, Q.,
J. S. He, and
A. J. Fulco.
1995.
The role of Barbie box sequences
as cis-acting elements involved in the barbiturate-mediated induction of
cytochromes P450BM-1 and P450BM-3 in Bacillus megaterium.
J. Biol.
Chem.
270:
4438-4450
31. Sommer, K. M., R. Ramsden, J. Sidhu, P. Costa, and C. J. Omiecinski. 1996. Promoter region analysis of the rat CYP2B1 and CYP2B2 genes. Pharmacogenetics 6: 369-374 [Medline].
32.
Park, Y.,
H. Li, and
B. Kemper.
1996.
Phenobarbital induction mediated by
a distal CYP2B2 sequence in rat liver transiently transfected in situ.
J. Biol.
Chem.
271:
23725-23728
33.
Honkakoski, P., and
M. Negishi.
1997.
Characterization of a phenobarbital-responsive enhancer module in mouse P450 Cyp2b10 gene.
J. Biol. Chem.
272:
14943-14949
34. Trottier, E., A. Belzil, C. Stoltz, and A. Anderson. 1995. Localization of a phenobarbital-responsive element (PBRE) in the 5'-flanking region of the rat CYP2B2 gene. Gene 158: 263-268 [Medline].
35.
Honkakoski, P.,
R. Moore,
K. A. Washburn, and
M. Negishi.
1998.
Activation by diverse xenochemicals of the 51-base pair phenobarbital-responsive enhancer module in the CYP2B10 gene.
Mol. Pharmacol.
53:
597-601
36. Kraft, R., J. Tardiff, K. S. Krauter, and L. A. Leinwand. 1988. Using mini-prep plasmid DNA for sequencing double stranded templates with Sequenase. Biotechniques 6: 544-546 [Medline].
37.
Sanger, F.,
S. Nicklen, and
A. R. Coulson.
1977.
DNA sequencing with
chain-terminating inhibitors.
Proc. Natl. Acad. Sci. USA
74:
5463-5467
38. Chomczynski, P., and N. Sacchi. 1987. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162: 156-159 [Medline].
39. Hanley, T., and J. P. Merlie. 1991. Transgene detection in unpurified mouse tail DNA by polymerase chain reaction. Biotechniques 10: 56 [Medline].
40. Honkakoski, P., and M. A. Lang. 1989. Mouse liver phenobarbital-inducible P450 system: purification, characterization, and differential inducibility of four cytochrome P450 isozymes from D2 mouse. Arch. Biochem. Biophys. 273: 42-57 [Medline].
41.
Engelhardt, J. F.,
E. D. Allen, and
J. M. Wilson.
1991.
Reconstitution of tracheal grafts with a genetically modified epithelium.
Proc. Natl. Acad. Sci.
USA
88:
11192-11196
42. Shephard, E. A., L. A. Forrest, A. Shervington, L. M. Fernandez, G. Ciaramella, and I. R. Phillips. 1994. Interaction of proteins with a cytochrome P450 2B2 gene promoter: identification of two DNA sequences that bind proteins that are enriched or activated in response to phenobarbital. DNA Cell Biol. 13: 793-804 [Medline].
43. Hoffmann, M., W. H. Mager, B. J. Scholte, A. Civil, and R. J. Planta. 1992. Analysis of the promoter of the cytochrome P-450 2B2 gene in the rat. Gene Expr. 2: 353-363 [Medline].
44.
Jaiswal, A. K.,
E. Rivkin, and
M. Adesnik.
1987.
5' flanking sequence of the
gene for rat hepatic cytochrome P450e.
Nucleic Acids Res.
15:
6755
45.
Bruno, M. D.,
R. J. Bohinski,
K. M. Huelsman,
J. A. Whitsett, and
T. R. Korfhagen.
1995.
Lung cell-specific expression of the murine surfactant
protein A (SP-A) gene is mediated by interactions between the SP-A promoter and thyroid transcription factor-1.
J. Biol. Chem.
270:
6531-6536
46. Nord, M., M. Lag, T. N. Cassel, M. Randmark, R. Becher, H. J. Barnes, P. E. Schwarze, J. A. Gustafsson, and J. Lund. 1998. Regulation of CCSP (PCB-BP/uteroglobin) expression in primary cultures of lung cells: involvement of C/EBP. DNA Cell Biol. 17: 481-492 [Medline].
47.
Bohinski, R. J.,
R. Di Lauro, and
J. A. Whitsett.
1994.
The lung-specific surfactant protein B gene promoter is a target for thyroid transcription factor
1 and hepatocyte nuclear factor 3, indicating common factors for organ-specific gene expression along the foregut axis.
Mol. Cell. Biol.
14:
5671-5681
48. Toonen, R. F., S. Gowan, and C. D. Bingle. 1996. The lung enriched transcription factor TTF-1 and the ubiquitously expressed proteins Sp1 and Sp3 interact with elements located in the minimal promoter of the rat Clara cell secretory protein gene. Biochem. J. 316: 467-473 .
49. Ray, M. K., C. Y. Chen, R. J. Schwartz, and F. J. DeMayo. 1996. Transcriptional regulation of a mouse Clara cell-specific protein (mCC10) gene by the NKx transcription factor family members thyroid transcription factor 1 and cardiac muscle-specific homeobox protein (CSX). Mol. Cell. Biol. 16: 2056-2064 [Abstract].
50. Park, Y., and B. Kemper. 1996. The CYP2B1 proximal promoter contains a functional C/EBP regulatory element. DNA Cell Biol. 15: 693-701 [Medline].
51.
Umek, R. M.,
A. D. Friedman, and
S. L. McKnight.
1991.
CCAAT-
enhancer binding protein: a component of a differentiation switch.
Science
251:
288-292
52.
Honkakoski, P.,
R. Moore,
J. Gynther, and
M. Negishi.
1996.
Characterization of phenobarbital-inducible mouse Cyp2b10 gene transcription in primary hepatocytes.
J. Biol. Chem.
271:
9746-9753
53. Forkert, P. G., M. L. Vessey, S. S. Park, H. V. Gelboin, and S. P. Cole. 1989. Cytochromes P-450 in murine lung. An immunohistochemical study with monoclonal antibodies. Drug Metab. Dispos. 17: 551-555 [Abstract].
54. Martin, D. I., and E. Whitelaw. 1996. The vagaries of variegating transgenes. Bioessays 18: 919-923 [Medline].
55.
Honkakoski, P.,
I. Zelko,
T. Sueyoshi, and
M. Negishi.
1998.
The nuclear
orphan receptor CAR-retinoid X receptor heterodimer activates the phenobarbital-responsive enhancer module of the CYP2B gene.
Mol. Cell
Biol.
18:
5652-5658
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