Published ahead of print on June 9, 2005, doi:10.1165/rcmb.2004-0405OC
© 2005 American Thoracic Society DOI: 10.1165/rcmb.2004-0405OC Characterization of GPRA, a Novel G ProteinCoupled Receptor Related to AsthmaDepartment of Medical Genetics, and Department of Anatomy, Biomedicum Helsinki, Department of Pathology, Haartman Institute, University of Helsinki; GeneOS Ltd.; and Department of Medicine, Helsinki University Central Hospital, Helsinki, Finland; and Department of Biosciences at Novum and Clinical Research Centre, Karolinska Institutet, Huddinge, Sweden Correspondence and requests for reprints should be addressed to Tarja Laitinen, GeneOS Ltd., Tukholmankatu 2, 00251 Helsinki, Finland. E-mail: tarja.laitinen{at}geneos.fi
We recently identified a novel positional asthma susceptibility gene, GPRA, which belongs to the G protein-coupled receptor family. In the present studies, we show that isoform specific activation of GPRA-A with its agonist, Neuropeptide S (NPS) resulted in significant inhibition of cell growth. GPRA has several variants due to extensive alternative splicing. We observed that only the full-length variants, GPRA-A and GPRA-B, with 7 transmembrane topology are transported into the plasma membrane, while the truncated proteins retain intracellular compartments. To clarify disease mechanism, we studied co-expression of the variants without finding any indication that truncated variants would inhibit the receptor transport into the plasma membrane. By using in situ hybridization and immunohistochemistry, we detected ubiquitous expression of GPRA-B, and frequent expression of GPRA-A in the epithelia of several organs including bronchi and gastrointestinal tract. Furthermore, we observed aberrant mRNA and protein expression levels of GPRA in the asthmatic bronchi. Finally, we demonstrate that GPRA and NPS are co-expressed in bronchial epithelium. In summary, this study provides evidence that GPRA might have functional relevance in modulating asthma by increased expression levels in the relevant tissues under diseased state and by potential inhibitory effect of GPRA-A activation on cell growth.
Key Words: asthma susceptibility GPRA G proteincoupled receptor Neuropeptide S
We have recently implicated by genetic linkage and association analyses a locus for asthma-related traits on chromosome 7p15-p14 (1, 2). The significant linkage mapping result was confirmed in two independent cohorts: families with asthma from Quebec and families with allergy from Finland. We could identify seven common haplotypes spanning across a 133-kb region in all three cohorts. The susceptibility haplotypes were closely related and distinct from the nonrisk haplotypes, and associated significantly with high total serum IgE values or asthma (2). Within the locus, there are two genes of which GPRA, a novel member of the G proteincoupled receptor superfamily (GPCRs), showed to be of particular interest. GPRA has two main transcripts, GPRA-A (also known as GPR154, PGR14, VRR1) and GPRA-B with alternative 3' exons, encoding proteins of 371 and 377 amino acid residues in length, respectively. Both isoforms have 7 transmembrane (TM) domains and the 14 conserved amino acid residues characteristic to the G proteincoupled receptor class A (2, 3). Structurally the closest homolog to GPRA-A is the vasopressin receptor V1a (27% amino acid similarity) (4). When bronchial biopsies from patients with asthma were compared with biopsies from control subjects by using immunohistochemistry, we found altered expression of GPRA-B in the smooth muscle cell layer among all the patients (n = 8) but not among the control subjects (n = 10) (2). The strongest disease associations are to noncoding SNPs (single nucleotide polymorphisms) within GPRA introns, and all but one SNP (Asn107Ile in exon 3 encoding the first exoloop of the receptor) in the susceptibility haplotypes are noncoding. These genetic associations have recently been confirmed in two independent large cohorts of childhood asthma (5, 6). We hypothesized that intronic SNPs may affect alternative splicing of mRNAs. A large diversity of 7 TM receptor variants with different TM topology (less than 7 TM domains) due to alternative splicing events have been shown to exist, but biological functions of these GPCR isoforms are elusive (79). However, studies with gonadotropin-releasing hormone receptor have suggested that truncated receptor proteins may inhibit the transport or signaling of the wild-type receptor (10, 11). A recent proteomic screening for endogenous ligands for GPRA identified a linear 20-residue peptide, named Neuropeptide S (NPS), that activated the receptor by increasing both intracellular cAMP and Ca2+ levels (12, 13). In the present study, we confirmed this interaction by using stable GPRA-Aexpressing cell clones and show that this activation has an effect on cell growth via isoform-specific signaling pathways. We analyzed the cellular location of transiently expressed recombinant GPRA splice variants and the effect of co-transfections with truncated variants on the transport of the full-length receptors into the plasma membrane. Finally, we report the expression pattern of GPRA in several cell and tissue types, and show endogenous expression of NPS in some of these. Our results suggest that the GPRA signaling pathway may be active in an autocrine or paracrine fashion in several tissues of relevance in allergies as well as asthma, and that GPRA-Aspecific signaling can mediate effects on cell growth.
Antibodies AntiGPRA-A and -B antibodies have been described previously (2). In addition, two nonisoform specific polyclonal antibodies were produced. Antibodies against the amino terminus were raised by immunizing a goat with the peptide TEGSFDSSGTGQTLDSSPVAKKG (corresponding to the residues 625 of GPRA) (University of Oulu, Oulu, Finland). Rabbit antibodies were produced against the third cytoloop SSYNRGLISK (corresponding to the residues 258267 of GPRA; Sigma Genosys Ltd, the Woodlands, UK). Antisera were purified by affinity chromatography with Sulfolink (N-terminus) and Ultralink Immobilization (cytoloop-3) kits according to the manufacturer's (Pierce, Rockford, IL) instructions. Blocking experiments using molar excess of free peptide as a competitor were also performed to demonstrate antibody specificities. Monoclonal anti-myc and anti-HA antibodies were purchased from Berkeley antibody company (Richmond, CA). Horseradish peroxidase (HRP)-conjugated goat anti-mouse or goat anti-rabbit secondary antibodies were from Jackson ImmunoResearch Laboratories Inc. (West Grove, PA).
Construction of Expression Vectors
Cell Culture
Western Blot Analysis For crude membrane preparations, transfected COS-1 cells were harvested in TE buffer (10 mM Tris, 0.1 mM EDTA, pH 7.5). The membrane fractions were separated by suspending cell pellets in TE buffer/0.32 mM sucrose, homogenizing mechanically, and centrifuging for 15 min at 380 x g at 4°C. Supernatant was further centrifuged for 30 min at 40,600 x g at 4°C. The pellet was suspended into sucrose-free TE buffer and centrifuged as above. Lysates were run on 12.5% SDS-PAGE gels and electroblotted to the PVDF membranes according to standard procedures. Nonspecific protein binding was prevented by incubating the membrane with 5% milk/ 0.1% Tween 20/TBS (TBST) for 1 h at room temperature. Thereafter, membranes were incubated with antiGPRA-A, antiGPRA-B, or antiGPRA-cytoloop-3 antibodies for 1 h at 37°C, washed with TBST, and then incubated with a dilution of 1:2,000 of HRP-conjugated anti-rabbit IgG antibody in 5% milk/ 0.1% TBST for 30 min at room temperature. The protein bands were visualized by using an ECL detection kit (Amersham Biosciences, Buckinghamshire, UK).
Stable GPRA-A and GPRA-BPositive 293H Cell Clones
Cell Growth Assay GPRA-Apositive and negative clones, and GPRA-Bpositive clones and 293H parental cells, were split into 96-well plates, 2 x 104 cells per well. NPS (1 µM) was added and the relative amount of viable cells was determined after 3 d by using CellTiter 96 One solution Cell Proliferation Assay (Promega, Southampton, UK) according the instructions of the manufacturer.
GPRA Activation Assay
Characterization of the Alternatively Spliced GPRA Transcripts
Transient Transfections To study the effects of different splice variants on the translocation of the full-length GPRA-A or -B receptors to the plasma membrane, COS-1 cells were cotransfected with myc-tagged GPRA-A or -B with 0.3-, 1-, 3-, and 10-fold amount of pCMV-GPRA-A, -B, -Bshort, -C, -D, -E, or -F. The empty pCMV-vector and ß-gal vector were used as controls. In all transfections, 2 µg of DNA and 8 µl of Fugene6 per 5 x 106 cells were used. The cells from one well of 6-well plate were divided into 16-wells of 96-well plate 24 h after transfection. The cells were analyzed with cell-based enzyme-linked immunosorbent assay (ELISA) 48 h after transfection.
Cell-Based ELISA
Immunofluorescence Microscopy
In Situ Hybridization Nonradioactive in situ hybridization on tissue sections was performed with Ventana Discovery device (Ventana Medical Systems, Tucson, Arizona). In brief, the samples were frozen sections or deparaffinized with heat treatment followed by post-fixation and RiboClear pretreatment. Samples were protease treated for 18 min and hybridized for 6 h at 65°C with both antisense and sense probes. Slides were then washed three times with 0.1x SSC (15 mM NaCl, 150 nM Sodium citrate, pH 7.0) at 75°C followed by the detection step, which includes 20 min incubation with biotinylated anti-DIG antibody (Jackson ImmunoResearch Laboratories) and 2 h incubation with the BCIP/NBT substrate. After color reaction the slides were washed, dehydrated and mounted with Mountex (HistoLab, Gothenburg, Sweden). All reagents for Discovery were provided by Ventana Medical Systems except for protease K (Roche), which was used at a concentration of 350 ng/µl.
Immunohistochemistry
Statistical Analysis
Specificity of GPRA Antibodies To study expression of GPRA, we raised four different polyclonal antibodies by immunization in rabbit or goat. We characterized the antibodies by peptide competition assays, by immunohistochemistry, and by Western blotting of cell lysates and tissues. AntiGPRA-A and -B antibodies were specific for the two alternative carboxy termini. AntiGPRA-N and anticytoloop-3 recognized the shared segments of the GPRA-A and -B isoforms.
Myc-tagged GPRA-A and -B constructs were transiently expressed in COS-1 cells. Cells were harvested 48 h after transfection and the crude membrane preparations were isolated and subsequently analyzed using anti-myc, antiGPRA-A, and antiGPRA-B antibodies. Calculated molecular weights of GPRA-A and -B are 42.7 and 43.1 kD, respectively. As shown in Figure 1A, antiGPRA-A and antiGPRA-B antibodies recognized recombinant proteins at
Endogenous Expression of GPRA Isoforms Using the same antibodies, expression of endogenous GPRA was studied in cell lysates from the BEAS-2B cell line, which originates from normal human bronchial epithelium and a myoblast cell line isolated from normal human skeletal muscle. BEAS-2B cells expressed GPRA-B and myoblasts expressed GPRA-A (Figure 1B). Thirty other human cell lines (including HL-60, MG-63, BE [2]-C, HEPG2, CCD-25Lu, and U-937) representing different tissue origins were also tested for GPRA specificity. GPRA-B was ubiquitously expressed in all cell lines studied, whereas GPRA-A was expressed only in myoblasts but not in any other cell line (data not shown).
When expression was further studied in human tissues by Western blot analyses, GPRA-B had broader expression pattern than the A isoform (Figure 1C). Analyses with antiGPRA-A antibodies reveled one intensive polypeptide band corresponding to molecular weight of
Cell Growth of Stably GPRA-AOverexpressing Cell Lines
Activation of GPRA-A Slows Down Cell Growth Biological activity of GPRA-A and -B overexpression in 293H cell clones was first verified by the nonradioactive GTP-binding assay. Parental 293H cells, three GPRA-Apositive, five GPRA-Bpositive, and two GPRA-Anegative clones were studied in the absence or presence of NPS (1 µM). Activated GPRA-Apositive clones had 23 fold increase in GTP-binding activity compared with negative clones (Figure 2A). GPRA-B clones were not activated by NPS (Figure 2B). To examine the effects of GPRA-A activation on cell growth, different GPRA-Apositive and negative cell clones were treated with NPS for 3 d, and the relative cell numbers were determined by using colorimetric Cell Titer 96 one solution proliferation assay (Figure 2C). Results indicated that the GPRA-Apositive cells grew slower than the GPRA-Anegative cells, in which is consistent with the cell number results shown in Table 1. The growth of GPRA-Apositive cells was further inhibited by NPS (1 µM) treatment (p < 0.05). The inhibitory effect was specifically shown with GPRA-Apositive clones because no effect on the cell growth was seen in GPRA-Anegative clones or GPRA-Bpositive clones (Figure 2D).
Characterization of the Splice Variants of GPRA
Cellular Localization of the GPRA Isoforms N-terminally conjugated myc-tagged pCMV-GPRA constructs were used in transient transfections of COS-1 cells to study expression and localization of different GPRA isoforms and particularly their translocation to the plasma membrane. The amount of myc-tagged protein was measured with a cell-based ELISA assay. When nonpermeabilized cells were used in the assay, the anti-myc antibodies detected the recombinant receptor successfully translocated into the plasma membrane. When cells were permeabilized, the total amount of the recombinant protein produced was measured. According to our assays, 71% of the produced GPRA-A and 52% of the GPRA-B were translocated to the plasma membrane, whereas all the five shorter variants stayed in the intracellular compartments (Table 2).
Cellular localization of different GPRA variants was further examined by immunofluorescence microscopy. COS-1 cells grown on glass slides were transiently transfected with myc-tagged GPRA constructs. Consistent with the results obtained by a cell-based ELISA assay, only GPRA-A and -B were translocated into the plasma membrane, while all the shorter GPRA isoforms were retained in the intracellular compartments (Figure 4).
To study whether various truncated GPRA isoforms are able to affect translocation of the full-length GPRA-A or -B to the plasma membrane, COS-1 cells were cotransfected with myc-tagged GPRA-A or -B construct, and a nontagged truncated variant construct with increasing concentrations. Subsequently, the cell-based ELISA assay was performed and the relative amount of the plasma membrane associated receptor was measured. The relative amounts of GPRA-A and GPRA-B remained constant despite the presence or absence of any other splice variant (data not shown). Therefore, translocation of GPRA-A and -B was not affected by shorter GPRA isoforms.
Tissue Expression Pattern of GPRA by In Situ Hybridization
A surprising result with ISH in normal tissues was a negative staining in smooth muscle, contrary to our immunohistochemical staining with isoform A antibodies. This could be due to low expression of the corresponding mRNA being below the detectable level in nonradioactive ISH. To study this, we analyzed bronchial tissue section from patients with asthma (n = 3), presuming that upregulation of GPRA-B isoform leads to a detectable ISH signal in smooth muscle layer. As a result, the GPRA-specific antisense probe showed a strong expression also at mRNA level in smooth muscle layer (Figure 6).
Tissue Expression Pattern of GPRA by Immunohistochemistry Immunostaining of 30 normal adult human tissue samples with antiGPRA-B antibodies revealed ubiquitous protein expression in glandular epithelia of bronchus, stomach, small intestine, colon, uterus, esophagus, spleen, kidney, pancreas, prostate, and breast. AntiGPRA-A antibodies showed weak staining in the epithelium of most tissues studied. However, compared with GPRA-B, the expression of GPRA-A was absent in some tissues such as stomach and small intestine (Figure 5). Smooth muscle cell layer in bronchial and arterial walls was constantly positive for GPRA-A in all tissues studied. Consistent with Western blotting, neither of the variants showed immunoreactivity in skeletal muscle. Interestingly, GPRA-A was expressed in the basal and GPRA-B in the apical surfaces of the colon epithelium and skin keratinocytes (Figure 5). The specificity of immunostaining was further verified with the GPRA-N antibodies (raised against the amino terminus of GPRA). Staining with the GPRA-N antibodies was overall weaker than with GPRA-A and -B antibodies, which detected intracellular epitopes of the receptor, but consistently, the GPRA-N antibodies recognized GPRA-A and -B in overlapping positions, that is, in different epithelial cells and in smooth muscle cells (Figure 5).
Expression Pattern of Endogenous NPS
The surprising implication of GPRA (GPR154) as a susceptibility gene for asthma and related disorders by genetic, animal model, and expression studies (2) will need to be complemented by more detailed biochemical and functional studies of its role in cells and tissues. In the present study, we explore several such aspects. We confirm the suggested activation of GPRA-A by NPS, and show that the agonist is endogenously expressed by epithelial cells in bronchi and gut, both sites of GPRA-A expression. We characterized new GPRA isoforms, and show that only the main isoforms GPRA-A and -B are translocated to the cell membrane in transiently transfected cells. However, the shorter isoforms do not disturb the processing of the two main isoforms when co-expressed. Activation of GPRA-A by its endogenous ligand leads to the isoform specific inhibition of cell growth while GPRA-B was not affected. Finally, we show distinct expression patterns for GPRA-A and B in several tissues, suggesting tissue-specific regulation of alternative splicing. In parallel with our positional cloning of GPRA as an asthma susceptibility gene, Vassilatis and coworkers reported GPRA-A (called PGR14) as an orphan receptor most homologous to the vasopressin receptor V1a (4). Gupte and colleagues designed a chimeric GPRA-A (called VRR1) to study GPRA signaling induced by vasopressin (13). That study suggested that upon activation, GPRA-A couples to both Gq and Gs signaling pathways. We have expanded on this finding and showed here that the activation of GPRA-A by the endogenous agonist NPS results in growth inhibition of stable GPRA-Aoverexpressing cell lines. We also demonstrated the endogenous expression of the agonist by ISH in epithelia of bronchi and colon, coinciding with GPRA-A expression. Based on these results, we also hypothesize that GPRA-A is activated by a paracrine or autocrine mechanism. GPRA (named NPS receptor) and NPS expression pattern in rat tissues have also been studied by others. Notable coexpression of GPRA and NPS was seen especially in different brain sections, for example, amygdala, thalamus, and hypothalamus (14). Interestingly, these results suggested that those brain regions coincide with the regions that have previously been reported to regulate arousal and anxiolytic-like behavior. Previous studies have also suggested that different allergens and extracellular matrix proteins modulate asthmatic airway epithelial and smooth muscle cell proliferation (1517). The GPRA-A signaling pathway thus becomes a candidate for mediating such effects. Our data revealed that GPRA has a complex transcript structure and in addition to full-length splice variants A and B, it expresses different truncated splice variants. The full-length protein isoforms of GPRA-A and -B successfully translocate to the plasma membrane, representing functional membrane receptors. In contrast, our study showed that shorter GPRA variants are located in the intracellular compartments, perhaps associated with cellular membranes, because the truncated isoforms still possess hydrophobic regions. Furthermore, in contrast to some other GPCRs (10, 11), shorter GPRA isoforms did not seem to affect the membrane translocation of full-length GPRA-A or -B. Whether the truncated isoforms have any functional roles remains to be determined. Taken together, our data indicated that truncated GPRA isoforms do not have a regulatory role on the transport of the receptor to the cell surface. Our data revealed that NPS has a potential inhibitory effect on cell growth via a GPRA-Amediated mechanism. In the present study, we demonstrated that GPRA-A and -B isoforms are plasma membrane receptors expressed in relevant tissues with respect to asthma and allergic diseases, and that they are distinctly regulated in tissues. The distinct expression patterns were documented both in different cell lines representing epithelia and smooth muscle as well as in tissue sections. Factors controlling alternative splicing are presently unknown, but may involve polymorphic sites in the genomic sequence of GPRA, as suggested for the AAA1 gene (2).
The authors thank Siv Knaappila, Tuula Lahtinen, Virpi Päivinen, Riitta Känkänen, and Morag Dixon for their skilful laboratory work, Satu Kuure for technical advice, and Paula Salmikangas for providing skeletal muscle cells.
This study has been supported by Finnish National Technology Agency Tekes, Academy of Finland, Sigrid Juselius Foundation, GeneOS Ltd, Ida Montin's Foundation, the Finnish Anti-Tuberculosis Association Foundation, Emil Aaltonen's Foundation; and Väinö and Laina Kivi's Foundation. Conflict of Interest Statement: T.L. is a stake holder in and the employee of GeneOS Ltd (Helsinki, Finland), which has submitted a patent on GPRA; J.K. is a stake holder, the member of the Board of Directors in GeneOS Ltd and an inventor in a patent application filed by GeneOS Ltd; M.R. is the employee of GeneOS Ltd; A.P. is the employee of GeneOS Ltd. V.P. is an inventor in a patent application filed by GeneOS Ltd; J.V. is as an inventor in a patent application filed by GeneOS Ltd; A.R.-S. does not have a financial relationship with a commercial entity that has an interest in the subject of this manuscript; A.L. does not have a financial relationship with a commercial entity that has an interest in the subject of this manuscript; L.A.L. is a stake holder, the member of the Board of Directors in GeneOS Ltd and an inventor in a patent application filed by GeneOS Ltd. Received in original form December 15, 2004 Received in final form May 4, 2005
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