Published ahead of print on May 11, 2006, doi:10.1165/rcmb.2006-0097OC
© 2006 American Thoracic Society DOI: 10.1165/rcmb.2006-0097OC Increased Protein Arginine Methylation in Chronic HypoxiaRole of Protein Arginine MethyltransferasesDepartment of Medicine II, University of Giessen Lung Center, Justus-Liebig University Giessen, Giessen, Germany Correspondence and requests for reprints should be addressed to Oliver Eickelberg, M.D., University of Giessen Lung Center, Department of Medicine II, Aulweg 123, Room 6-11, D-35392 Giessen, Germany. E-mail: oliver.eickelberg{at}innere.med.uni-giessen.de
Asymmetric dimethylarginine (ADMA) is an endogenous inhibitor of nitric oxide synthesis. ADMA is generated by catabolism of proteins containing methylated arginine residues, and its levels are correlated with endothelial dysfunction in systemic cardiovascular diseases. Arginine methylation of cellular proteins is catalyzed by protein arginine methyltransferases (PRMT). The expression and localization of PRMT in the lung has not been addressed. Here, we sought to analyze the expression of PRMT isoforms in the lung and to determine whether PRMT expression is altered during exposure to chronic hypoxia (10% oxygen). Adult mice were exposed to hypoxia for up to 3 wk, and lung tissues were harvested and processed for RT-PCR, Western blotting, immunohistochemistry, and determination of tissue ADMA levels. All PRMT isoforms investigated were detected at the mRNA and protein level in mouse lung, and were localized primarily to the bronchial and alveolar epithelium. In lungs of mice subjected to chronic hypoxia, PRMT2 mRNA and protein levels were up-regulated, whereas the expression of all other PRMT isoforms remained unchanged. This was mainly due to increased expression of PRMT2 in alveolar type II cells, which did not express detectable levels of PRMT2 under normoxic conditions. Consistent with these observations, lung ADMA levels and ADMA/L-Arginine ratios were increased under hypoxic conditions. These results demonstrate that PRMTs are expressed and functional in the lung, and that hypoxia is a potent regulator of PRMT2 expression and lung ADMA concentrations. These data suggest that structural and functional changes caused by hypoxia may be linked to ADMA metabolism.
Key Words: bronchial epithelium immunohistochemistry protein methylation vessels
Hypoxia is a potent stimulus for lung vascular and interstitial remodeling during development, and in diseases such as chronic obstructive pulmonary disease (COPD), pulmonary hypertension, and asthma (13). Long-term (chronic) hypoxia modulates gene expression and thus can induce structural changes in the lung (4). These changes include increased fibroblast and vascular smooth muscle cell proliferation and enhanced deposition of extracellular matrix, resulting in sustained increases in pulmonary vascular resistance (4, 5). In the response to hypoxia, the release of short-lived mediators such as nitric oxide (NO) represents a key mechanism in the control of vascular resistance and vascular cell proliferation (6, 7). The role of NO production in the hypoxic lung, however, remains controversial. Several studies have shown decreased NO production during alveolar hypoxia, which may be due to O2 substrate limitation, NO synthase (NOS) expression, or NOS activity, while other studies have shown the opposite (6). In recent years, our basic understanding of the control of NOS has advanced with the discovery of endogenous inhibitors of NOS, such as asymmetric dimethylarginine (ADMA) and NG-monomethyl-L-arginine (L-NMMA). ADMA and L-NMMA both belong to the class of naturally occurring analogs of the NO precursor L-arginine, and act as endogenous inhibitors of all NOS isoforms (8, 9). ADMA and L-NMMA are generated through degradation of cellular proteins that contain methylated arginine residues (10). It has been demonstrated that, during post-translational modification of many intracellular proteins, nitrogen atoms of arginine residues can be covalently mono- or di-methylated by the action of protein arginine methyltransferases (PRMT), a recently discovered gene family (11). Up to now, eight PRMT isoforms have been cloned and characterized in mammals, displaying varying degrees of substrate specificity (1012). PRMTs catalyze the transfer of one or two methyl groups provided by S-adenosyl-methionine to select target proteins, either in symmetric configuration (leading to symmetric dimethylarginine [SDMA]), or in asymmetric configuration (leading to ADMA). PRMTs can be divided into two groups: type I PRMT catalyze ADMA formation in select target proteins, whereas type II PRMT catalyze SDMA formation through methylation of both guanidino nitrogens. In addition, all PRMT can also catalyze monomethylation, leading to the formation of L-NMMA. Free cellular ADMA and L-NMMA can be hydrolyzed by dimethylarginine dimethylaminohydrolases (DDAH) (10). The biological impact of protein arginine methylation remains to be fully elucidated, but it has been shown to modify protein functions by regulating proteinprotein interactions, both negatively and positively. Furthermore, arginine methylation in target proteins plays a role in the regulation of RNA binding, control of transcription, DNA repair, protein localization, signal transduction, and recycling of membrane receptors (11). Large-scale proteomic approaches have unraveled a potentially broad range of substrate proteins for PRMT methylation, suggesting a significant role for arginine methylation in cellular processes (13). Moreover, increased methylation of cellular proteins by PRMT may significantly contribute to the level of free methylarginines via protein degradation, as direct methylation of free arginines has not been demonstrated. Circulating ADMA levels have been assessed in a variety of systemic cardiovascular diseases, and are increased in conditions associated with hypoxia, renal failure, pulmonary hypertension, heart failure, or hypercholesterolemia (10, 14). A recent study by Smith and coworkers demonstrated that pathophysiologic concentrations of ADMA are sufficient to elicit distinct changes in gene expression of coronary endothelial cells, suggesting that increased extracellular ADMA levels also regulate cellular functions (15). Despite the wealth of information available on circulating plasma ADMA levels, however, no studies have thus far correlated tissue ADMA and PRMT levels. The tissue expression and localization of PRMT isoforms in the lung remains entirely unknown. In this study, we therefore sought to characterize the expression and localization pattern of PRMT isoforms in the lung, and investigated whether PRMT expression and lung ADMA levels changed during exposure to chronic hypoxia.
Mouse Models All animal studies were performed according to the guidelines of the University of Giessen and approved by the local authorities (Regierungspräsidium Giessen, no. II25.319c2015; GI20/10-Nr.22/2000). Male BALB/c mice (2022 g; Charles River, Sulzfeld, Germany) were exposed to normobaric normoxia (FIO2 of 0.21) or hypoxia (FIO2 of 0.10) in a ventilated chamber system (16). After the indicated times under hypoxic conditions, the lungs were flushed via a catheter in the pulmonary artery with Krebs Henseleit buffer (125 mM NaCl, 4.3 mM KCl, 1.1 mM KH2PO4, 2.4 mM CaCl2, 1.3 mM MgCl2, 23.8 mM NaHCO3, and 13.32 mM glucose, equilibrated with 5.3% CO2) and pressure-fixed (20 cm H2O) with 4% (wt/vol) buffered paraformaldehyde in PBS (pH 7.4). Tracheas were ligated and lungs/hearts were excised en bloc, submerged in 4% (wt/vol) paraformaldehyde in PBS overnight, and processed for paraffin embedding and sectioning. Lungs were cut into 3-µm sections and processed as described for immunohistochemistry (17). A separate set of lungs was immediately removed and snap-frozen in liquid nitrogen for RNA and protein extraction. Hematocrit and right heart hypertrophy were measured in all study animals. To measure the ratio of right ventricle wall/left ventricle plus septum (RV/LV+S), the right ventricular walls were trimmed from the left ventricles plus septa, air-dried, and weighed. Similarly, timed pregnant mice were killed at the indicated dates, and pups removed surgically. Lungs were excised from pups under magnification and immediately processed for further analysis, as described above.
RT-PCR
Western Blot Analysis Frozen lung tissues were homogenized in lysis buffer (20 mM Tris-Cl [pH 7.5], 150 mM NaCl, 1 mM EDTA, 1 mM EGTA, 1% [wt/vol] Triton-X 100, 2.5 mM sodium pyrophosphate, and 1 mM -glycerophosphate). The proteinase inhibitor cocktail Complete (Roche Molecular Biochemicals, Indianapolis, IN) and the phosphatase inhibitor Na3VO4 (1 mM) were added to the lysis buffer immediately before homogenization. Homogenates were dispersed by multiple aspirations through a 24-gauge needle, agitated at 4°C for 30 min, and centrifuged at 10,000 x g (4°C) for 10 min. The protein concentrations of tissue lysates were measured using Quick Start Bradford Dye Reagent according to the manufacturer's instructions (Bio-Rad, Hercules, CA). Equal amounts of protein (20 µg) were separated on 7.5% SDS-PAGE gels and transferred to PVDF-PLUS membranes (GE Osmonics Inc., Trevose, PA). Western blots were performed with antibodies against PRMT1 (at a dilution of 1:2,000), PRMT3 (1:2,000), PRMT4 (1:1,000), PRMT5 (1:2,000), PRMT7 (1:1,000), asymmetric dimethylarginine (ASYM24-MDMA; 1:2,000), all from Upstate (Dundee, UK). Anti-PRMT2 (1:1,000) and Anti-PRMT6 (1:500) were obtained from Abcam (Cambridge, UK) and Imgenex (San Diego, CA), respectively. After incubation with secondary antibodies, specific bands were visualized by autoradiography using enhanced chemiluminescence according to the manufacturer's instructions (SuperSignal; Pierce Chemicals, Rockford, IL). Protein expression was normalized to -tubulin levels detected by anti -tubulin (1:2,500, clone B-7; Santa Cruz Biotechnology, Inc., Santa Cruz, CA). Densitometric analysis (n 6 for each group) was performed with Quantity One (Bio-Rad) and analyzed using two-tailed Student's t test.
Immunohistochemical Analysis
Isolation of Basic Amino Acids from Lung Crude Extracts
Derivatization and Chromatographic Separation
PRMT Expression in Mouse Lung We initially characterized full-length PRMT1-7 transcripts by cloning and sequencing full-length cDNAs from adult mouse lung. Mouse PRMT1-6 isoforms have previously been cloned from the mouse; however, our report constitutes the first description of PRMT7 from the mouse. This PRMT7 sequence has been deposited in the GenBank database (accession no. AY673972). Figure 1A demonstrates strong expression of all PRMT isoforms in mouse lung, with no evidence of splice isoforms expressed. All sequences were fully sequenced and shown to be identical to the provisional RefSeq depositions at GenBank. We next analyzed whether lung PRMT levels were regulated during lung development. To do so, mouse lungs were harvested at distinct intervals from E13 to adults and subjected to RT-PCR analysis. As depicted in Figure 1B, PRMT1-7 were abundantly expressed throughout development. While no changes in expression levels were observed in cases of PRMT1, 5, and 7, distinct changes were noted for PRMT2, 3, 4, and 6. While PRMT3 and 4 expression peaked at P7 with a decline thereafter, PRMT2 and 6 expression steadily increased to adulthood (Figure 1B). These data must be cautiously interpreted, however, since mRNA and protein expression levels do not always correlate, as was evident in our hypoxia studies (see below).
We then characterized whether PRMT1-6 RNA expression was altered when mice were exposed to 3 wk of chronic normobaric hypoxia (FIO2 of 0.10). To ensure proper hypoxic exposure, we determined the ratio of dried right ventricle to left ventricle plus septum (RV/LV+IVS), an indicator of right ventricular hypertrophy secondary to chronic hypoxia-induced pulmonary hypertension. The RV/LV+IVS gradually increased from 0.33 ± 0.02 under normoxia, 0.45 ± 0.01 after 7 d of hypoxia, to 0.48 ± 0.02 after 21 d of hypoxia (P < 0.005). Similarly, the hematocrit values increased from 43 ± 0 under normoxia, 53.6 ± 0.6 after 7 d of hypoxia, to 56.6 ± 1.2 after 21 d of hypoxia (P < 0.01). Figure 2 depicts changes in gene expression in lungs of mice exposed to 3 wk of hypoxia, as assessed by RNA and protein analysis. Whereas RNA levels of PRMT1, 3, 4, 5, 6, 7 and the loading control HSC70 did not differ between samples from normoxic and hypoxic mice, PRMT2 RNA levels were upregulated after 3 wk of hypoxia (Figure 2A). As represented in Figure 2B, Western blot analyses revealed an even higher upregulation of PRMT2 protein levels under hypoxia. This effect was specific for PRMT2, as the expression of all other PRMTs investigated did not change significantly in the lungs of hypoxic mice (Figures 2B and 3). To quantify PRMT expression levels, we performed densitometric analyses from at least three different Western blots each. Densitometry indicated a significant difference in PRMT2 protein expression under hypoxia, whereas we did not observe significant expression differences for all other PRMT isoforms (Figure 3).
PRMT Localization in Mouse Lung To investigate the cellular localization of PRMT enzymes in the lung in detail, we performed immunohistochemical analyses on lung sections obtained from normoxic and hypoxic animals. Figure 4 depicts representative immunohistochemical stainings demonstrating specific and distinct localization patterns of PRMT1-5 in the mouse lung. PRMT1 exhibited strong homogeneous staining in airway and alveolar type II epithelial cells. PRMT2, 3, and 5 exhibited intermittent staining, and were localized in the cytosol of nonciliated airway epithelial cells and alveolar epithelial cells, but notably absent in vascular smooth muscle and endothelial cells. PRMT4 was present in the apical part of airway epithelial cells and in alveolar epithelial type II cells (Figure 4). The expression pattern and localization of these isoforms (i.e., PRMT1, 3, 4, and 5) did not differ between lungs derived from normoxic and hypoxic mice (data not shown).
PRMT2 was expressed in the cytosol of some, but not all airway epithelial cells in the lungs of mice exposed to normoxic conditions (Figure 4). In contrast to other PRMT isoforms, PRMT2 expression levels changed after hypoxic exposure, where staining became evident in alveolar type II cells and macrophages (Figure 5). The product of PRMT activity, methylated proteins, were also localized to alveolar type II cells and macrophages using an antibody raised against mono- and dimethylated proteins (Figure 5).
Methylated Proteins in Mouse Lung To analyze whether the end-product of PRMT activity, free cellular ADMA, was also found in the mouse lung, we developed an HPLC-based method to accurately quantify ADMA in crude tissue extracts. Using this protocol, ADMA and arginine were fully separated from other components of lung lysates (Figures 6A and 6B). To confirm the identity of ADMA, crude tissue extract was spiked with ADMA (Figure 6B, lower panel). Taken together, this method permits the simultaneous quantification of arginine and ADMA in crude tissue extracts. As depicted in Figure 6C, hypoxic conditions caused a significant increase in free cellular ADMA levels after 7 d (19.4 ± 2.4 pmol/mg protein versus 9.2 ± 0.7 pmol/mg protein) and a moderate increase after 21 d (12.3 ± 1.9 pmol/mg protein), indicating increased PRMT activity. Interestingly, we also observed a slight reduction in free arginine (813 ± 107 pmol/mg protein versus 1,219 ± 180 pmol/mg protein) after 21 d, while arginine levels after 7 d did not change significantly (Figure 6C). In conclusion, lung ADMA levels and ADMA/arginine ratios were increased under hypoxic conditions (Table 2).
The key observations of this study are that (1) PRMT isoforms are expressed at the mRNA and protein levels in the mouse lung, and are localized predominantly in airway and alveolar type II epithelial cells; (2) PRMT2 expression is selectively upregulated in alveolar epithelial cells in response to chronic hypoxia; and (3) increased PRMT2 expression coincides with increased tissue ADMA levels and decreased L-Arg/ADMA ratios in hypoxic mouse lungs. These data thus support an important role for PRMT enzymes in the lung, and suggest an as yet unappreciated role for PRMT-mediated ADMA generation in pulmonary homeostasis and hypoxia-induced changes in lung epithelial cells. PRMTs are the only group of enzymes known to methylate arginine residues in select target proteins, which thus far remains the only known function of PRMTs (11, 19). In this study, we could show that all PRMT isoforms are expressed in the mouse lung by RT-PCR, Western blot, and immunohistochemical analysis. We were able to detect full-length mRNAs corresponding to the entire open reading frames of PRMT1-7 by RT-PCR, with corresponding protein expression patterns for PRMT1-6. Although three splice variants have been described for PRMT1 (20) and four splice variants have been described for PRMT4 (21), no evidence of alternative splicing was observed in the mouse lung (Figure 1). We were unable to detect PRMT7 protein expression, as we were lacking suitable antibodies for detection by Western Blot or immunohistochemistry, respectively. However, our report constitutes the first report of PRMT7 in the mouse. Much to our interest, PRMT isoforms were expressed in the bronchial and alveolar epithelium, suggesting an important role for PRMT function in this pulmonary compartment. We detected a significant increase in PRMT2 mRNA and protein expression in animals subjected to 3 wk of chronic hypoxia, which coincided with increased protein methylation in lung homogenates. Assuming constant protein turnover, this would be expected to lead to increased ADMA concentrations under hypoxia, which has indeed been demonstrated previously in hypoxic lungs (22). In a recent study, Millatt and coworkers demonstrated increased lung ADMA levels in hypoxic rat lungs, which coincided with decreased dimethylarginine dimethylaminohydrolase (DDAH) I expression and activity (22). DDAH I and II are the enzymes responsible for ADMA degradation. In addition, chronic hypoxia also leads to decreased expression of the second known ADMA-metabolizing enzyme DDAH II in pig lungs (23), thus confirming the observation that hypoxia affects lung ADMA levels via dual regulation of the PRMT-ADMA-DDAH axis: it increases PRMT expression and concomitantly decreases DDAH expression, thus leading to a synergistic overall accumulation of ADMA concentrations. Interestingly, PRMT and DDAH isoforms both localize to bronchial epithelial cells, suggesting a physiologic role for these enzymes in lung epithelial homeostasis. While PRMTs in vascular smooth muscle have been suggested to be part of the systemic arginine-ADMA metabolism (10), the role of PRMT expression in bronchial and alveolar epithelial cells is intriguing and remains to be elucidated. Since ADMA can act as an endogenous inhibitor of NOS enzymes, a system of crucial importance for the alveolarendothelial crosstalk, PRMT in bronchial and alveolar epithelial cells may represent an important local regulatory system for NO release and activity in the lung.
A synergistic effect of hypoxia on PRMT, DDAH, and NOS activity in the lung is suggested to lead to increased vasoconstriction and vascular remodeling (2225). PRMT activity may thus be directly linked to the NO system by ADMA generation. Pathophysiologic roles for ADMA as an endogenous NOS inhibitor have indeed been suggested in several cardiovascular diseases, including atherosclerosis, hypertension, or diabetes (2632). It is highly unlikely, however, that such a complex system (i.e., the evolvement of seven divergent PRMT isoforms) merely serves to generate a chemically rather simple byproduct (i.e., ADMA or SDMA). In this respect, the PRMT system probably serves additional roles that remain elusive. Several investigators have suggested that the post-translational modification of target proteins by PRMT arginine methylation modulates protein function (19, 3336). Among the proteins identified thus far are RNA-binding proteins, such as Sam68 (37), and proteins involved in signal transduction, such as STAT-1 (38), STAT-6 (39), or the EWS protein (40). The time course and target arginine residues in these examples have been well described, but relatively little is known about the effects of methylation on protein function. Furthermore, no substrate of PRMT2 has been described to date, although several molecules with proposed roles in tissue remodeling and respiratory physiology are known to form complexes with PRMT2, including estrogen receptor
The authors are indebted to Werner Seeger, M.D., for critical reading of the manuscript, and to all members of the Eickelberg Lab for valuable discussions.
This study was supported by grants from the Deutsche Forschungsgemeinschaft (DFG-SFB547) to N.W., F.G., and O.E. and the Alexander von Humboldt Foundation (a Sofja Kovalevskaja Award to O.E. and a Research Fellowship to R.E.M.). D.Z. and K.E.K. were supported by predoctoral fellowships of the International Graduate Program "Molecular Biology and Medicine of the Lung (MBML)." Originally Published in Press as DOI: 10.1165/rcmb.2006-0097OC on May 11, 2006 Conflict of Interest Statement: None of the authors has a financial relationship with a commercial entity that has an interest in the subject of this manuscript. Received in original form March 4, 2006 Accepted in final form April 14, 2006
This article has been cited by other articles:
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||